Analyzing gene-to-metabolites co-expression

Use this tool to detect potential co-regulated metabolites based on their co-expression to genes. Additional information is provided for found metabolites - structure similarity and their potential annotation.

The metabolite-to-gene expression similarity is calculated based on the binary data of 12 tissues, including different leaves, roots, flowers and seeds tissues. The Ochiai coefficient is used as a measurement for the expression similarity. The structure similarity is calculated based on Common Neutral Losses (NL) and Fragment Similarity (NDP) [Li et al].

Read more... about the used data sets.

Network parameters: