Description:

With the "Electronic Fluorescent Pictograph" (eFP) Browser you have a ability to visualize expression data in an intuitive way. You can choose amoung several mircoarray experiments, as well as RNA-Seq and metabololic data.

This eFP Browser combines the data for 10 microarray experiments (256 microarrays), RNA-seq data of 20 tissues and Metabolite data of 14 tissues.

Here is a tutorial that describes this analysis.

This tool is an adaptation of the eFP Browser developed by Nicholas J. Provart et al.

Parameters:

Data Source	Primary Gene ID	Signal Threshold
Coronatine spray on irAOC Cytokines and senescence Metabolite data (binary) Metabolite data (intensity) N. attenuata under herbivore attack NaHER1 NaMYB5 transcription factor NaMYC2 transcription factors RNA-Seq Volatile exposure - 30 min Volatile exposure - 6 h WRKY3/6 WRKY9

Experiment information:

Title: RNA-Seq data from 20 tissues

Description:
RNA-Seq data from 20 tissues

Weblink:

Responsible person: tbrockmoeller

Visualisation

• This probe/gene set reaches its maximum signal intensity (expression potential) of 8.49 in the RNA-Seq data source with probeID of NIATv7_g41919.

• CUST_151184_PI422650789, Na_454_37798, NIATv7_g41919, scaffold40556, scaffold40557 was used as the probe set identifier for your primary gene NIATv7_g41919. The mean of this probes was used as expression value.