Search for genes or metabolites.
Welcome to the Nicotiana attenuata resource. This platform provides tools to analyze the transcriptome and metabolome of this model organism.
Recommended browser: Firefox, Chrome
Toolbox
eFP Browser
The "Electronic Fluorescent Pictograph" (eFP) Browser provides the ability to visualize expression data in an intuitive way. Choose among mircoarray experiments, RNA-Seq and metabololic data.
Gene → Gene
Explore co-regulated genes and discover the functions of unknown genes.
Type the GeneID and start the analysis.
Gene → Metabolite
Explore co-regulated metabolites and discover the functions of unknown genes.
Type the GeneID and start the analysis.
Phylogenetic analysis
Here you can explore the evolutionary history of N. attenuata and N. obtusifolia genes in combination with 10 other plant species.
Metabolite → Gene
Explore co-regulated genes and discover the functions of unknown genes.
Type the MetaboliteID and start the analysis.
Metabolite → Metabolite
Explore co-regulated metabolites and discover the functions of unknown metabolites.
Type the MetaboliteID and start the analysis.
Structure similarity
Explore the metabolite structure similarity network based on Common Neutral Losses and Fragment Similarity.
Type the MetaboliteID and start the analysis.
Utah field data
Explore the field data of Utah. You can choose among Light Intensity, Weather and Soil data.